Daniel Garrido
email dgarridoc@uc.cl
Keywords from publications:
Bifidobacterium Gut Microbiome Bacteroides Cross -feeding Proteomics Biosensor Ver más...Profile
EDUCATION
Ph.D. University of California, Davis. Food Science, March 2012
B.Sc. Universidad de Chile, Facultad de Ciencias. Engineering in Molecular Biotechnology, March 2005
Graduated with honors.
PROFESSIONAL EXPERIENCE
Assistant Professor, Dept. of Chemical Engineering and Bioprocesses. Pontifical Catholic University of Chile. Starting April 2013.
Postdoctoral Researcher. University of California, Davis CA. 2012-2013. Advisor: David Mills, Dept. of Viticulture & Enology and Foods for Health Institute.
Graduate student researcher. University of California, Davis. September 2007-March 2012. Advisor: David Mills, Foods for Health Institute at UC Davis.
Teaching Assistant. University of California, Davis. January 2008-March 2012
Network
Keywords from publications
| Title | Year | Doi |
|---|---|---|
| Modeling Metabolic Interactions in a Consortium of the Infant Gut Microbiome | 2017 | https://doi.org/10.3389/fmicb.2017.02507 |
| Human milk oligosaccharides and infant gut bifidobacteria: Molecular strategies for their utilization | 2018 | https://doi.org/10.1016/j.fm.2017.09.001 |
| Simulation and modeling of dietary changes in the infant gut microbiome | 2018 | https://doi.org/10.1093/femsec/fiy140 |
| Stochastic simulation of multiscale complex systems with PISKaS: A rule-based approach | 2018 | https://doi.org/10.1016/j.bbrc.2017.11.138 |
| Draft genome sequences of Cylindrospermopsis raciborskii strains CS-508 and MVCC14, isolated from freshwater bloom events in Australia and Uruguay | 2018 | https://doi.org/10.1186/s40793-018-0323-1 |
| Evaluating the Capacity of Human Gut Microorganisms to Colonize the Zebrafish Larvae (Danio rerio) | 2018 | https://doi.org/10.3389/fmicb.2018.01032 |
| Prebiotics Mediate Microbial Interactions in a Consortium of the Infant Gut Microbiome | 2017 | https://doi.org/10.3390/ijms18102095 |
| Distinct patterns in the gut microbiota after surgical or medical therapy in obese patients | 2017 | https://doi.org/10.7717/peerj.3443 |
| Proteomic analyses of Bacteroides ovatus and Bifidobacterium longum in xylan bidirectional culture shows sugar cross-feeding interactions | 2023 | https://doi.org/10.1016/j.foodres.2023.113025 |
| Engineered Bacteria for Short-Chain-Fatty-Acid-Repressed Expression of Biotherapeutic Molecules | 2023 | https://doi.org/10.1128/spectrum.00049-23 |
| Screening Microbial Interactions During Inulin Utilization Reveals Strong Competition and Proteomic Changes in <i>Lacticaseibacillus paracasei</i> M38 | 2023 | https://doi.org/10.1007/s12602-023-10083-5 |
| Developing a Fluorescent Inducible System for Free Fucose Quantification in <i>Escherichia coli</i> | 2023 | https://doi.org/10.3390/bios13030388 |
| Structure of co-expression networks of <i>Bifidobacterium</i> species in response to human milk oligosaccharides | 2023 | https://doi.org/10.3389/fmolb.2023.1040721 |
| Effect of Sucralose Intake on Human and Mouse/Rat Gut Microbiota Composition: A Systematic Review and Meta-Analysis | 2023 | https://doi.org/10.1080/87559129.2023.2212045 |
| Using metabolic networks to predict cross-feeding and competition interactions between microorganisms | 2024 | https://doi.org/10.1128/spectrum.02287-23 |
| Genome-scale metabolic modeling of the human milk oligosaccharide utilization by <i>Bifidobacterium longum</i> subsp. <i>infantis</i> | 2024 | https://doi.org/10.1128/msystems.00715-23 |
| Characterization and Identification of Probiotic Features in <i>Lacticaseibacillus Paracasei</i> Using a Comparative Genomic Analysis Approach | 2022 | https://doi.org/10.1007/s12602-022-09999-1 |
| Editorial: Systems modeling: Approaches and applications-Volume II | 2022 | https://doi.org/10.3389/fmolb.2022.1048727 |
| Differences in the composition and predicted functions of the intestinal microbiome of obese and normal weight adult dogs | 2022 | https://doi.org/10.7717/peerj.12695 |
| Editorial: Systems Modeling: Approaches and Applications | 2020 | https://doi.org/10.3389/fmolb.2020.620464 |
| Molecular Insights Into <i>O</i>-Linked Glycan Utilization by Gut Microbes | 2020 | https://doi.org/10.3389/fmicb.2020.591568 |
| The Gut Microbiome After Bariatric Surgery | 2019 | https://doi.org/10.1016/B978-0-12-815249-2.00024-5 |
| Engineered Probiotics for Detection and Treatment of Inflammatory Intestinal Diseases | 2020 | https://doi.org/10.3389/fbioe.2020.00265 |
| <i>Pleione</i>: A tool for statistical and multi-objective calibration of Rule-based models | 2019 | https://doi.org/10.1038/s41598-019-51546-6 |
| Cross-feeding interactions of gut microbes mediated by O-linked glycans from casein glycomacropeptide | 2024 | https://doi.org/10.1016/j.jff.2024.106269 |
| Preliminary Functional Analysis of the Gut Microbiome in Colic Horses | 2024 | https://doi.org/10.3390/ani14223222 |
| Screening competition and cross-feeding interactions during utilization of human milk oligosaccharides by gut microbes | 2024 | https://doi.org/10.20517/mrr.2023.61 |
| Advancement in the development of mRNA-based vaccines for respiratory viruses | 2024 | https://doi.org/10.1111/imm.13844 |
School Co-Authors
* Authors who are no longer vigent are not clickable.
External Co-Authors
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Josu Delgado2 publications
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Santiago Ruiz-Moyano2 publications
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Marco Vega-Sagardia2 publications
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Maria Barra2 publications
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Georgios Papazisis1 publication
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Rodrigo Santibanez1 publication
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Claudia Silva-Andrade1 publication
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Chung-Yu Chen1 publication
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Tal Danino1 publication
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Mario A. Ramirez1 publication
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Tomas Proschle1 publication
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Herbert Herzog1 publication
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Edgardo Galan-Vasquez1 publication
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Pablo A. Gonzalez1 publication
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Felipe Lara1 publication
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Alberto J. M. Martin1 publication
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Cheng-Hao Tien1 publication
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Eva Cebrian Cabezon1 publication
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Ricardo A. Loaiza1 publication
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Kevin J. Gonzalez-Morelo1 publication
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Hsien-Yu Fan1 publication
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Felipe Melis1 publication
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Susan M. Bueno1 publication
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Kineret Serebrinsky-Duek1 publication
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Romina Diaz1 publication
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Loreto Roman1 publication
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Yue-Hwa Chen1 publication
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Samantha Nunez1 publication
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Carolina Roman-Cardenas1 publication
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Pamela Thomson1 publication
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Yang-Ching Chen1 publication
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Ernesto Perez-Rueda1 publication
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Alexis M. Kalergis1 publication
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Tays Troncoso-Bravo1 publication
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Felipe Melis-Arcos1 publication
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Aitak Farzi1 publication
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Kevin J. Gonzalez-Morelo1 publication